Highly selective c-Jun N-terminal kinase (JNK) 2 and 3 inhibitors with in vitro CNS-like pharmacokinetic properties prevent neurodegeneration

Bioorg Med Chem Lett. 2011 Jan 1;21(1):315-9. doi: 10.1016/j.bmcl.2010.11.010. Epub 2010 Nov 5.

Abstract

In this Letter, we describe the discovery of selective JNK2 and JNK3 inhibitors, such as 10, that routinely exhibit >10-fold selectivity over JNK1 and >1000-fold selectivity over related MAPKs, p38α and ERK2. Substitution of the naphthalene ring affords an isoform selective JNK3 inhibitor, 30, with approximately 10-fold selectivity over both JNK1 and JNK2. A naphthalene ring penetrates deep into the selectivity pocket accounting for the differentiation amongst the kinases. Interestingly, the gatekeeper Met146 sulfide interacts with the naphthalene ring in a sulfur-π stacking interaction. Compound 38 ameliorates neurotoxicity induced by amyloid-β in human cortical neurons. Lastly, we demonstrate how to install propitious in vitro CNS-like properties into these selective inhibitors.

MeSH terms

  • Aminopyridines / chemistry*
  • Aminopyridines / pharmacokinetics
  • Aminopyridines / therapeutic use
  • Animals
  • Binding Sites
  • Central Nervous System / metabolism
  • Computer Simulation
  • Humans
  • Mice
  • Microsomes, Liver / metabolism
  • Mitogen-Activated Protein Kinase 10 / antagonists & inhibitors*
  • Mitogen-Activated Protein Kinase 10 / metabolism
  • Mitogen-Activated Protein Kinase 9 / antagonists & inhibitors*
  • Mitogen-Activated Protein Kinase 9 / metabolism
  • Neurodegenerative Diseases / drug therapy*
  • Neuroprotective Agents / chemistry*
  • Neuroprotective Agents / pharmacokinetics
  • Neuroprotective Agents / therapeutic use
  • Protein Kinase Inhibitors / chemistry*
  • Protein Kinase Inhibitors / pharmacokinetics
  • Protein Kinase Inhibitors / therapeutic use
  • Structure-Activity Relationship
  • Triazines / chemistry*
  • Triazines / pharmacokinetics
  • Triazines / therapeutic use

Substances

  • Aminopyridines
  • Neuroprotective Agents
  • Protein Kinase Inhibitors
  • Triazines
  • Mitogen-Activated Protein Kinase 10
  • Mitogen-Activated Protein Kinase 9